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Keyboard shortcuts

On macOS use Cmd where Ctrl is written.

The keys below are what the app starts with. Format ▸ Keyboard shortcuts… lists every one of them and lets you put an action on another key: click Change and press the keys you want. A shortcut needs Alt or Ctrl — a key on its own types a base in the sequence view — and the app refuses a key the browser keeps for itself or one another action already has, saying which. Default puts one action back, All back to their defaults the lot. Ctrl+S, Ctrl+F, Ctrl+Z, Ctrl+Shift+←/→ and the ranges (Alt+1…9, Alt+Shift+PageUp/PageDown) are fixed. Your changes are kept with the rest of the view's settings, in this browser.

Files

KeysAction
Ctrl+S, Ctrl+Shift+SDownload GenBank (a working copy's changes are reviewed first)
Alt+LCopy a share link
Alt+1 … Alt+9Bring the first … ninth open document forward
Alt+0Bring the Bench forward
Alt+WClose the document in front (its tab)
Alt+Shift+PageUp, Alt+Shift+PageDownMove the document in front one tab left or right
Ctrl+V with nothing openOpen a pasted GenBank or FASTA record, or bare bases
Alt+KCompare with another tab or a file (File ▸ Compare with…)
Escape in Export figure…Stop an export under way (the dialog stays); again to close

Editing

KeysAction
A C G T …Insert a base at the cursor, or replace the selection
BackspaceDelete the base before the cursor, or the selection
DeleteDelete the base after the cursor, or the selection
Ctrl+CCopy the selection with its features
Ctrl+XCut the selection with its features
Ctrl+VPaste at the cursor or over the selection
Ctrl+ZUndo
Ctrl+Shift+Z, Ctrl+YRedo

On the Bench, where there is no sequence to edit, Ctrl+Z and Ctrl+Shift+Z (or Ctrl+Y) undo and redo changes to the shelf.

Showing and hiding

Everything here is Alt and one key. Bare letters type bases in the sequence view and Ctrl belongs to the browser, so Alt is the modifier left for the view. In front of a protein, Alt+C, Alt+T, Alt+R and Alt+V do nothing, since a protein has no complement, translations, cut sites or map, and Alt+[ and Alt+] step through the tabs it has.

KeysAction
Alt+CComplement strand on or off
Alt+TTranslations under CDS features on or off
Alt+RCut sites on or off (the ticked enzymes are kept)
Alt+GGC content track on or off
Alt+EEdit marks off, and back to the baseline that was chosen
Alt+SCollapse the sidebar to its rail, or bring the panel back
Alt+VThe next of the views: Sequence, Map, Both
Alt+[, Alt+]The sidebar tab above or below (opens the sidebar)
Alt+=, Alt+−Larger or smaller sequence text
Alt+OOpen the Format menu; Tab walks its rows, ←/→ a row's choices, Escape closes
Alt+YOpen the Style menu for the selected bases (colour, size)
Alt+UOpen the Case menu for the selected bases (upper, lower)

Selecting and moving

KeysAction
← →Move the cursor one base
↑ ↓Move the cursor one row
Shift + arrowsExtend the selection
Ctrl+Shift+←, Ctrl+Shift+→Extend the selection a codon at a time
Home, EndStart or end of the row
Ctrl+Home, Ctrl+EndStart or end of the sequence
Shift+clickExtend the selection to the clicked position
Ctrl+ASelect all
EscapeClear the selection
Alt+NSelect the next marked change
Alt+Shift+NSelect the previous marked change
Alt+N, Alt+Shift+NIn the alignment's large view: next, previous difference (a whole run, among those the Filter lets through); follows a rebound Next change
Ctrl+F, Ctrl+GIn the alignment's large view: find a motif; go to a position (not rebindable; Esc closes the form, then the window)
Alt+TIn the alignment's large view: Amino acids on or off (follows a rebound Translations)
↑, ↓In the alignment's large view, with the alignment focused: pick the sample above or below

Find

KeysAction
Ctrl+FOpen find
EnterNext match
Shift+EnterPrevious match
EscapeClose find

Map

InputAction
Wheel, pinchZoom about the pointer
Double-click a featureZoom to fit it
Double-click elsewhereZoom in one step
Drag empty space, middle-dragPan when zoomed in

The Bench's product map takes the same, and a drag anywhere on it pans, since there is nothing on it to select.

Panes

Alt+B takes the keyboard to the next boundary between two panes (see Viewing); there:

InputAction
← → or ↑ ↓Move the boundary a little; past a floor, fold away
Page Up, Page DownMove it further
Home, EndTake it to either pane's floor
EscapeBack to where the keyboard was before Alt+B
Double-click the boundaryPut that boundary back where it was

Feature editor

In the editor under a feature in the Features tab (see Features):

KeysAction
EnterSave changes
EscapeCancel; a feature just made with Add feature goes again

Help

KeysAction
? (outside the sequence view)Open this guide
EscapeClose it